Efficient enrichment of undifferentiated GFR alpha 1+ spermatogonia from immature rat testis by magnetic activated cell sorting

Spermatogonial stem cells (SSCs) are a documented source for adult multipotent stem cells. Thus, the isolation of SSCs is of great interest. However, the isolation of spermatogonia from mammalian testes is difficult because of their low total numbers and the lack of well-characterized cell surface markers. Glial-cell-derived neurotrophic factor family receptor alpha-1 (GFRα1) is expressed on undifferentiated mouse spermatogonia (including SSCs) and plays a crucial role, in rodents, for the maintenance of SSCs mediated by the Sertoli cell product GDNF. The present study has aimed to optimize the sorting efficiency and total cell yield of magnetic activated cell sorting (MACS) with anti-GFRα1 antibodies. Because of the technical limitations intrinsic to the magnetic columns, various sorting setups and strategies were compared. Use of Mini-MACS (MS) columns for single cell suspensions from 7-day-old rat testes resulted in a three-fold enrichment of GFRα1-positive cells in sorted fractions versus presorted fractions. However, with this method, only 1.77% of cells loaded onto the column were recovered in the sorted fraction. A sequential two-step sorting approach did not improve this poor yield. We therefore evaluated cell separation by using larger volume Midi-MACS (LS) columns. Enrichment of GFRα1-positive cells in sorted fractions was four-fold, and 14.5% of cells loaded onto the column were directed to the sorted fraction. With this method, approximately half of all GFRα1-positive cells present in the sample were found in the sorted fraction. We conclude that GFRα1 serves as a suitable surface marker for the enrichment of rat spermatogonia, and that the large-volume Midi-MACS separation system is superior to the routinely used small-volume Mini-MACS separation system. This work was financially supported by startup funds from the University Münster, NIH grant U54 HD 008610, Center grant, project 1 (to S.S.), a doctoral scholarship from the Ernst Schering Research Foundation (to K.G.), and a Young Investigator Grant from the Lance Armstrong Foundation (to J.E.).     

Pretreatment of pulp mill secondary sludge for high-rate anaerobic conversion to biogas

Three pretreatment methods were compared based on their ability to increase the extent and rate of anaerobic bioconversion of pulp mill secondary sludge to biogas. The pretreatment technologies used in these experiments were: (i) thermal pretreatment performed at 170 °C; (ii) thermochemical (caustic) pretreatment performed at pH 12 and 140 °C; and (iii) sonication performed at 20 kHz and 1 W mL⁻¹. Sludge samples were obtained from a sulfite and a kraft pulp mill, and biochemical methane potential (BMP) assays were performed using microbial granules obtained from a high-rate anaerobic digester operating at a pulp mill. Biogas production from untreated sludge was 0.05 mL mg⁻¹ of measured chemical oxygen demand (COD) and 0.20 mL mg⁻¹ COD for kraft and sulfite sludge, respectively. Thermal pretreatment had the highest impact on sludge biodegradability. In this case, biogas yield and production rate from sulfite sludge increased by 50% and 10 times, respectively, while biogas yield and production rate from kraft sludge increased by 280% and 300 times, respectively. Biogas yield correlated to soluble carbohydrate content better than soluble COD.     

生物废水处理系统的细胞自动机模型

建立了活性污泥处理生物废水的细胞自动机模型,对活性污泥生物量与有机物浓度动态进行了研究,提出了计算活性污泥回流循环比的方法.结果表明,在Moore邻居模型下废水达标排放所需时间较Von. Neumann邻居模型少,不同生长阶段的微生物浓度波动具有时滞性.稳定期有机物浓度和生物量不受活性污泥初始浓度的影响.活性污泥处理生物废水的细胞自动机模型有助于为污水处理提供理论依据.     

Cytokine-induced activation of mixed lineage kinase 3 requires TRAF2 and TRAF6

Mixed lineage kinase 3 (MLK3) is a mitogen-activated protein kinase kinase kinase (MAP3K) that activates multiple mitogen-activated protein kinase (MAPK) pathways in response to growth factors, stresses and the pro-inflammatory cytokine, tumor necrosis factor (TNF). MLK3 is required for optimal activation of stress activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK) signaling by TNF, however, the mechanism by which MLK3 is recruited and activated by the TNF receptor remains poorly understood. Here we report that both TNF and interleukin-1β (IL-1β) stimulation rapidly activate MLK3 kinase activity. We observed that TNF stimulates an interaction between MLK3 and TNF receptor associated factor (TRAF) 2 and IL-1β stimulates an interaction between MLK3 and TRAF6. RNA interference (RNAi) of traf2 or traf6 dramatically impairs MLK3 activation by TNF indicating that TRAF2 and TRAF6 are critically required for MLK3 activation. We show that TNF also stimulates ubiquitination of MLK3 and MLK3 can be conjugated with lysine 48 (K48)- and lysine 63 (K63)-linked polyubiquitin chains. Our results suggest that K48-linked ubiquitination directs MLK3 for proteosomal degradation while K63-linked ubiquitination is important for MLK3 kinase activity. These results reveal a novel mechanism for MLK3 activation by the pro-inflammatory cytokines TNF and IL-1β.     

Fully coupled activated sludge model (FCASM): Model development

A sub-microscopic mechanism model named Fully Coupled Activated Sludge Model (FCASM) about biological nutrient removal in the wastewater treatment process was developed in the present study. The functional organisms existing simultaneously in the activated sludge system were separated into eight groups, including aerobic heterotrophic organisms, nitrite reducing organisms, nitrate reducing organisms, ammonium oxidizing autotrophs, nitrite oxidizing autotrophs, non-denitrifying phosphorus-accumulating organisms (PAOs), denitrifying phosphorus-accumulating bacteria (DPB), and glycogen-accumulating organisms (GAOs). In FCASM, the interaction relationships of the eight functional microorganisms were taken fully into account. FCASM could model biological nitrogen removal via nitrite by splitting nitrification process and denitrification process into two-step reactions, and the autotrophs and denitrifying organisms were divided into two groups, respectively. What’s important, FCASM included the anaerobic maintenance processes of sequential utilization of polyphosphate followed by glycogen for PAOs and DPB and glycolysis of the intracellular stored glycogen for GAOs.     

Remediation of chromite ore processing residue by pyrolysis process with sewage sludge

The present work developed a novel technique to treat chromite ore processing residue (COPR). The process involved mixing the COPR with sewage sludge followed by pyrolysis. The gaseous organic fraction generated during pyrolysis of sludge was beneficial to Cr(VI) reduction. Process variables, such as the amount of sludge added to COPR (sludge-to-COPR (S/C) ratio), heating temperature, reaction time and particle size, were systematically varied, and their influences on the Cr(VI) reduction in COPR were investigated. Cr(VI) content had decreased greatly, from 3384 mg kg⁻¹ for untreated COPR to less than 30 mg kg⁻¹ for COPR treated at 600 °C.     

农田土壤固碳措施的温室气体泄漏和净减排潜力

农田土壤固碳措施作为京都议定书认可的大气CO2减排途径受到了广泛关注.研究表明,农田土壤固碳措施在主要农业国家和全球都具有很大的固碳潜力.但是,实施农田土壤固碳措施有可能影响农业中化石燃料消耗和其他农业投入的CO2排放和非CO2温室气体排放.这些土壤碳库以外的温室气体排放变化可能抵消部分甚至全部土壤固碳效果,构成了农田土壤固碳措施的温室气体泄漏.因此,将土壤固碳和温室气体泄漏综合计算的净减排潜力成为了判定土壤固碳措施可行性的首要标准.综述总结了目前较受重视的一些农田措施(包括施用化学氮肥、免耕和保护性耕作、灌溉、秸秆还田、施用禽畜粪便以及污灌)的土壤固碳潜力,温室气体泄漏和净减排潜力研究成果.结果表明,温室气体泄漏可抵消以上措施土壤固碳效益的-241%～660%.建议在今后的研究中,应该关注土壤碳饱和、气候变化及土地利用变化对农田固碳措施温室气体泄漏和净减排潜力的评估结果的影响.     

酸碱调控污泥厌氧发酵实现乙酸累积及微生物种群变化

摘要：【目的】通过对污泥厌氧发酵pH调控,研究挥发性脂肪酸的累积、产酸微生物种群变化及产氢产乙酸菌群对乙酸产生的贡献。【方法】测定不同pH条件下污泥厌氧发酵过程中挥发性脂肪酸的累积;分别应用末端限制性片段长度多态性（T-RFLP）和荧光原位杂交技术（FISH）分析产酸系统中微生物种群结构的变化及产氢产乙酸菌的数量。【结果】 pH为10.0时,有机酸和乙酸的产率在发酵结束时分别达到652.6 mg COD/g-VS和322.4 mg COD/g-VS,显著高于其它pH条件。T-RFLP结果表明,pH值为12     

The role of the mitochondrial permeability transition pore in heart disease

Like Dr. Jeckyll and Mr. Hyde, mitochondria possess two distinct persona. Under normal physiological conditions they synthesise ATP to meet the energy needs of the beating heart. Here calcium acts as a signal to balance the rate of ATP production with ATP demand. However, when the heart is overloaded with calcium, especially when this is accompanied by oxidative stress, mitochondria embrace their darker side, and induce necrotic cell death of the myocytes. This happens acutely in reperfusion injury and chronically in congestive heart failure. Here calcium overload, adenine nucleotide depletion and oxidative stress combine forces to induce the opening of a non-specific pore in the mitochondrial membrane, known as the mitochondrial permeability transition pore (mPTP). The molecular nature of the mPTP remains controversial but current evidence implicates a matrix protein, cyclophilin-D (CyP-D) and two inner membrane proteins, the adenine nucleotide translocase (ANT) and the phosphate carrier (PiC). Inhibition of mPTP opening can be achieved with inhibitors of each component, but targeting CyP-D with cyclosporin A (CsA) and its non-immunosuppressive analogues is the best described. In animal models, inhibition of mPTP opening by either CsA or genetic ablation of CyP-D provides strong protection from both reperfusion injury and congestive heart failure. This confirms the mPTP as a promising drug target in human cardiovascular disease. Indeed, the first clinical trials have shown CsA treatment improves recovery after treatment of a coronary thrombosis with angioplasty.     

Simultaneous saccharification and co‐fermentation of paper sludge to ethanol by Saccharomyces cerevisiae RWB222. Part II: Investigation of discrepancies between predicted and observed performance at high solids concentration

The simultaneous saccharification and co‐fermentation (SSCF) kinetic model described in the companion paper can predict batch and fed batch fermentations well at solids concentrations up to 62.4 g/L cellulose paper sludge but not in batch fermentation at 82.0 g/L cellulose paper sludge. Four hypotheses for the discrepancy between observation and model prediction at high solids concentration were examined: ethanol inhibition, enzyme deactivation, inhibition by non‐metabolizable compounds present in paper sludge, and mass transfer limitation. The results show that mass transfer limitation was responsible for the discrepancy between model and experimental data. The model can predict the value of high paper sludge SSCF in the fermentation period with no mass transfer limitation. The model predicted that maximum ethanol production of fed‐batch fermentation was achieved when it was run as close to batch mode as possible with the initial solids loading below the mass transfer limitation threshold. A method for measuring final enzyme activity at the end of fermentation was also developed in this study. Biotechnol. Bioeng. 2009; 104: 932–938. © 2009 Wiley Periodicals, Inc.